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Thursday, 29th of April 2010 at 11:07:20 AM

Metatranscriptomics reveals unique microbial small RNAs in the ocean’s water column

Metatranscriptomics reveals unique microbial small RNAs in the ocean’s water column

Yanmei Shi, et al., Nature Continue reading Metatranscriptomics reveals unique microbial small RNAs in the ocean’s water column

Thursday, 29th of April 2010 at 11:05:48 AM

Shotgun metaproteomics of the human distal gut microbiota

Shotgun metaproteomics of the human distal gut microbiota

Nathan C Verberkmoes, et al., International Society for Microbial Ecology

Continue reading Shotgun metaproteomics of the human distal gut microbiota

Tuesday, 13th of April 2010 at 07:11:50 PM

Worlds within worlds: evolution of the vertebrate gut microbiota

Worlds within worlds: evolution of the vertebrate gut microbiota

Ruth E. Ley, et al., Nature Reviews Microbiology

Continue reading Worlds within worlds: evolution of the vertebrate gut microbiota

Tuesday, 13th of April 2010 at 07:10:17 PM

Quantifying environmental adaptation of metabolic pathways in metagenomics

Quantifying environmental adaptation of metabolic pathways in metagenomics

Tara A. Gianoulisa, et al., PNAS

Continue reading Quantifying environmental adaptation of metabolic pathways in metagenomics

Tuesday, 30th of March 2010 at 09:42:41 PM

Statistical Methods for Detecting Differentially Abundant Features in Clinical Metagenomic Samples

Statistical Methods for Detecting Differentially Abundant Features in Clinical Metagenomic Samples

James Robert White, et al. PLOS computational biology

Continue reading Statistical Methods for Detecting Differentially Abundant Features in Clinical Metagenomic Samples

Tuesday, 30th of March 2010 at 09:41:30 PM

PHACCS, an online tool for estimating the structure and diversity of uncultured viral communities using metagenomic information

PHACCS, an online tool for estimating the structure and diversity of uncultured viral communities using metagenomic information

Florent Angly, et al. BMC Bioinformatics

Continue reading PHACCS, an online tool for estimating the structure and diversity of uncultured viral communities using metagenomic information

Tuesday, 9th of March 2010 at 12:20:50 PM

Analysis and comparison of very large metagenomes with fast clustering and functional annotation

Analysis and comparison of very large metagenomes with fast clustering and functional annotation

Weizhong Li, BMC Bioinformatics 2009

Continue reading Analysis and comparison of very large metagenomes with fast clustering and functional annotation

Tuesday, 2nd of March 2010 at 05:17:18 PM

Barcodes for genomes and applications

Barcodes for genomes and applications

Fengfeng Zhou, et al. BMC Bioinformatics

Continue reading Barcodes for genomes and applications

Tuesday, 2nd of March 2010 at 05:15:58 PM

CompostBin: A DNA composition-based algorithm for binning environmental shotgun reads

CompostBin: A DNA composition-based algorithm for binning environmental shotgun reads

Sourav Chatterji, et al. RECOMB.

Continue reading CompostBin: A DNA composition-based algorithm for binning environmental shotgun reads

Tuesday, 16th of February 2010 at 12:15:51 PM

ESPRIT: estimating species richness using large collections of 16S rRNA pyrosequences

ESPRIT: estimating species richness using large collections of 16S rRNA pyrosequences

Yijun Sun, et al. Nucleic Acids Research

Continue reading ESPRIT: estimating species richness using large collections of 16S rRNA pyrosequences